Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rft1Q8C3B8 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.09■□□□□ 0.65
Rft1Q8C3B8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rft1Q8C3B8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rft1Q8C3B8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rft1Q8C3B8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rft1Q8C3B8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rft1Q8C3B8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.08■□□□□ 0.65
Rft1Q8C3B8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rft1Q8C3B8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rft1Q8C3B8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rft1Q8C3B8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rft1Q8C3B8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.08■□□□□ 0.64
Rft1Q8C3B8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rft1Q8C3B8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rft1Q8C3B8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rft1Q8C3B8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.07■□□□□ 0.64
Rft1Q8C3B8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rft1Q8C3B8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rft1Q8C3B8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rft1Q8C3B8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Rft1Q8C3B8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rft1Q8C3B8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rft1Q8C3B8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.06■□□□□ 0.64
Rft1Q8C3B8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rft1Q8C3B8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.04■□□□□ 0.64
Rft1Q8C3B8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rft1Q8C3B8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rft1Q8C3B8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rft1Q8C3B8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rft1Q8C3B8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.04■□□□□ 0.64
Rft1Q8C3B8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Terc-201ENSMUST00000082862 423 ntBASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.03■□□□□ 0.64
Rft1Q8C3B8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rft1Q8C3B8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rft1Q8C3B8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rft1Q8C3B8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rft1Q8C3B8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rft1Q8C3B8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rft1Q8C3B8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rft1Q8C3B8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rft1Q8C3B8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19■□□□□ 0.63
Rft1Q8C3B8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rft1Q8C3B8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19■□□□□ 0.63
Rft1Q8C3B8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19■□□□□ 0.63
Rft1Q8C3B8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19■□□□□ 0.63
Rft1Q8C3B8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Rft1Q8C3B8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rft1Q8C3B8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rft1Q8C3B8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rft1Q8C3B8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rft1Q8C3B8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rft1Q8C3B8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rft1Q8C3B8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rft1Q8C3B8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.98■□□□□ 0.63
Rft1Q8C3B8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rft1Q8C3B8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rft1Q8C3B8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.98■□□□□ 0.63
Rft1Q8C3B8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rft1Q8C3B8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms