Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chd9Q8BYH8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Chd9Q8BYH8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.46■□□□□ 0.38
Chd9Q8BYH8 Gm27405-201ENSMUST00000184201 112 ntBASIC17.46■□□□□ 0.38
Chd9Q8BYH8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd9Q8BYH8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd9Q8BYH8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chd9Q8BYH8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd9Q8BYH8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd9Q8BYH8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd9Q8BYH8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd9Q8BYH8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Gm27801-201ENSMUST00000184174 223 ntBASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd9Q8BYH8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.42■□□□□ 0.38
Chd9Q8BYH8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.42■□□□□ 0.38
Chd9Q8BYH8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd9Q8BYH8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd9Q8BYH8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd9Q8BYH8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd9Q8BYH8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Chd9Q8BYH8 Gm26833-201ENSMUST00000180899 440 ntBASIC17.41■□□□□ 0.38
Chd9Q8BYH8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd9Q8BYH8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Chd9Q8BYH8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.39■□□□□ 0.38
Chd9Q8BYH8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd9Q8BYH8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd9Q8BYH8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd9Q8BYH8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chd9Q8BYH8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.39■□□□□ 0.37
Chd9Q8BYH8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd9Q8BYH8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chd9Q8BYH8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd9Q8BYH8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Chd9Q8BYH8 Gm10849-201ENSMUST00000100397 618 ntBASIC17.37■□□□□ 0.37
Chd9Q8BYH8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd9Q8BYH8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Chd9Q8BYH8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.37■□□□□ 0.37
Chd9Q8BYH8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd9Q8BYH8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd9Q8BYH8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Gm40881-201ENSMUST00000223397 166 ntBASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd9Q8BYH8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd9Q8BYH8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chd9Q8BYH8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.35■□□□□ 0.37
Chd9Q8BYH8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd9Q8BYH8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd9Q8BYH8 Gm37179-201ENSMUST00000194862 823 ntBASIC17.34■□□□□ 0.37
Chd9Q8BYH8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd9Q8BYH8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms