Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.73■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.72■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Notumos-201ENSMUST00000151998 2659 ntBASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Gm9812-201ENSMUST00000061934 968 ntBASIC16.69■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.68■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Gm4799-201ENSMUST00000095396 657 ntBASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms