Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clk1P22518 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.89■□□□□ 0.77
Clk1P22518 Gm12366-201ENSMUST00000121722 873 ntBASIC19.89■□□□□ 0.77
Clk1P22518 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.89■□□□□ 0.77
Clk1P22518 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Clk1P22518 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk1P22518 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk1P22518 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.89■□□□□ 0.77
Clk1P22518 Gm5786-201ENSMUST00000085368 882 ntBASIC19.89■□□□□ 0.77
Clk1P22518 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clk1P22518 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.88■□□□□ 0.77
Clk1P22518 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk1P22518 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk1P22518 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.88■□□□□ 0.77
Clk1P22518 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clk1P22518 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk1P22518 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.88■□□□□ 0.77
Clk1P22518 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk1P22518 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Clk1P22518 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Clk1P22518 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Clk1P22518 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.87■□□□□ 0.77
Clk1P22518 Gm7332-201ENSMUST00000118351 454 ntBASIC19.87■□□□□ 0.77
Clk1P22518 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.87■□□□□ 0.77
Clk1P22518 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Clk1P22518 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk1P22518 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk1P22518 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk1P22518 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk1P22518 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk1P22518 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk1P22518 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clk1P22518 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.86■□□□□ 0.77
Clk1P22518 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Clk1P22518 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk1P22518 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk1P22518 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk1P22518 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk1P22518 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Clk1P22518 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.85■□□□□ 0.77
Clk1P22518 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Clk1P22518 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.85■□□□□ 0.77
Clk1P22518 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clk1P22518 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk1P22518 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.84■□□□□ 0.77
Clk1P22518 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clk1P22518 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.84■□□□□ 0.77
Clk1P22518 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.84■□□□□ 0.77
Clk1P22518 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk1P22518 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clk1P22518 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Clk1P22518 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk1P22518 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Clk1P22518 Gm27502-201ENSMUST00000183495 199 ntBASIC19.83■□□□□ 0.77
Clk1P22518 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk1P22518 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk1P22518 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk1P22518 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clk1P22518 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk1P22518 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk1P22518 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.82■□□□□ 0.76
Clk1P22518 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk1P22518 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk1P22518 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Clk1P22518 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Clk1P22518 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk1P22518 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.82■□□□□ 0.76
Clk1P22518 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk1P22518 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clk1P22518 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.81■□□□□ 0.76
Clk1P22518 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk1P22518 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Clk1P22518 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clk1P22518 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk1P22518 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clk1P22518 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk1P22518 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk1P22518 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk1P22518 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clk1P22518 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk1P22518 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Clk1P22518 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Clk1P22518 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk1P22518 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk1P22518 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms