Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Gm14042-201ENSMUST00000120139 833 ntBASIC14.07□□□□□ -0.16
Speer3W4VSP1 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.07□□□□□ -0.16
Speer3W4VSP1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.07□□□□□ -0.16
Speer3W4VSP1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Speer3W4VSP1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.06□□□□□ -0.16
Speer3W4VSP1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.06□□□□□ -0.16
Speer3W4VSP1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.06□□□□□ -0.16
Speer3W4VSP1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Speer3W4VSP1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm25911-201ENSMUST00000157621 56 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm29013-201ENSMUST00000187431 237 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm37935-201ENSMUST00000192012 982 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm37629-201ENSMUST00000193635 1050 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm38170-201ENSMUST00000195404 816 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms