Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Gm6222-201ENSMUST00000120787 396 ntBASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Gm16476-201ENSMUST00000221544 139 ntBASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn2Q9R0A1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm24543-201ENSMUST00000103867 82 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm2445-201ENSMUST00000182798 989 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm27680-201ENSMUST00000184192 160 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Mir7023-201ENSMUST00000185093 64 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm45453-201ENSMUST00000211758 853 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm6888-201ENSMUST00000221983 706 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Shd-206ENSMUST00000225145 998 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 BC001981-202ENSMUST00000191393 1545 ntBASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn2Q9R0A1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn2Q9R0A1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Gm8410-201ENSMUST00000117225 605 ntBASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Gm13453-201ENSMUST00000118708 357 ntBASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Gm20949-201ENSMUST00000206478 952 ntBASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Dupd1-202ENSMUST00000224735 548 ntBASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn2Q9R0A1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms