Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
U2af1Q9D883 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
U2af1Q9D883 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC18.01■□□□□ 0.47
U2af1Q9D883 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
U2af1Q9D883 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
U2af1Q9D883 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
U2af1Q9D883 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
U2af1Q9D883 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
U2af1Q9D883 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Gm12960-201ENSMUST00000120017 1066 ntBASIC18■□□□□ 0.47
U2af1Q9D883 Gm15429-201ENSMUST00000151268 798 ntBASIC18■□□□□ 0.47
U2af1Q9D883 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
U2af1Q9D883 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18■□□□□ 0.47
U2af1Q9D883 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18■□□□□ 0.47
U2af1Q9D883 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
U2af1Q9D883 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
U2af1Q9D883 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
U2af1Q9D883 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Gm11478-201ENSMUST00000117851 599 ntBASIC17.99■□□□□ 0.47
U2af1Q9D883 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.99■□□□□ 0.47
U2af1Q9D883 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.99■□□□□ 0.47
U2af1Q9D883 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.99■□□□□ 0.47
U2af1Q9D883 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.99■□□□□ 0.47
U2af1Q9D883 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
U2af1Q9D883 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
U2af1Q9D883 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
U2af1Q9D883 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.99■□□□□ 0.47
U2af1Q9D883 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.99■□□□□ 0.47
U2af1Q9D883 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
U2af1Q9D883 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
U2af1Q9D883 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
U2af1Q9D883 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.98■□□□□ 0.47
U2af1Q9D883 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
U2af1Q9D883 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
U2af1Q9D883 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Gm2495-201ENSMUST00000191160 466 ntBASIC17.98■□□□□ 0.47
U2af1Q9D883 Gm44719-201ENSMUST00000206404 149 ntBASIC17.98■□□□□ 0.47
U2af1Q9D883 Gm5186-201ENSMUST00000218781 920 ntBASIC17.98■□□□□ 0.47
U2af1Q9D883 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
U2af1Q9D883 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
U2af1Q9D883 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
U2af1Q9D883 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
U2af1Q9D883 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
U2af1Q9D883 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
U2af1Q9D883 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
U2af1Q9D883 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms