Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vps28Q9D1C8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Gm14928-201ENSMUST00000120198 477 ntBASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps28Q9D1C8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Mir698-201ENSMUST00000102164 109 ntBASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Gm18624-201ENSMUST00000220966 658 ntBASIC14.05□□□□□ -0.16
Vps28Q9D1C8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps28Q9D1C8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Gm23984-201ENSMUST00000157139 203 ntBASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps28Q9D1C8 Mir6392-201ENSMUST00000184924 108 ntBASIC14.04□□□□□ -0.16
Vps28Q9D1C8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms