Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tmem88Q9D0N8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Tmem88Q9D0N8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Tmem88Q9D0N8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gm12497-201ENSMUST00000138778 237 ntBASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tmem88Q9D0N8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tmem88Q9D0N8 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms