Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm14928-201ENSMUST00000120198 477 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm6222-201ENSMUST00000120787 396 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm29310-201ENSMUST00000185468 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21825-201ENSMUST00000185728 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm29109-201ENSMUST00000185895 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21896-201ENSMUST00000186520 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21873-201ENSMUST00000186728 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21794-201ENSMUST00000187056 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21880-201ENSMUST00000187275 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21826-201ENSMUST00000187451 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21198-201ENSMUST00000188393 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21749-201ENSMUST00000189343 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21901-201ENSMUST00000189568 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm29424-201ENSMUST00000189716 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm28599-201ENSMUST00000189838 694 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21867-201ENSMUST00000189917 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm29269-201ENSMUST00000190087 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21722-201ENSMUST00000190153 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm28423-201ENSMUST00000190701 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21899-201ENSMUST00000190745 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21910-201ENSMUST00000191163 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21849-201ENSMUST00000191571 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm28678-201ENSMUST00000191593 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm20910-201ENSMUST00000193268 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm21871-201ENSMUST00000194621 696 ntBASIC15.37■□□□□ 0.05
Smc1aQ9CU62 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smc1aQ9CU62 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm4875-201ENSMUST00000118257 786 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm3436-201ENSMUST00000179930 840 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm16476-201ENSMUST00000221544 139 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Dupd1-202ENSMUST00000224735 548 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Gm20445-201ENSMUST00000061905 565 ntBASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smc1aQ9CU62 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smc1aQ9CU62 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms