Protein–RNA interactions for Protein: Q9CQ48

Nudcd2, NudC domain-containing protein 2, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd2Q9CQ48 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Gm44492-201ENSMUST00000197012 141 ntBASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd2Q9CQ48 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd2Q9CQ48 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nudcd2Q9CQ48 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nudcd2Q9CQ48 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nudcd2Q9CQ48 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nudcd2Q9CQ48 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nudcd2Q9CQ48 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nudcd2Q9CQ48 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms