Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Gm44397-201ENSMUST00000195950 113 ntBASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b1Q99NB9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b1Q99NB9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b1Q99NB9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.52□□□□□ -0.09
Sf3b1Q99NB9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Mir1982-201ENSMUST00000157368 74 ntBASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.51□□□□□ -0.09
Sf3b1Q99NB9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms