Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Msh4Q99MT2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.38□□□□□ -0.27
Msh4Q99MT2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.38□□□□□ -0.27
Msh4Q99MT2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.38□□□□□ -0.27
Msh4Q99MT2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.38□□□□□ -0.27
Msh4Q99MT2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Syt7-204ENSMUST00000223586 1344 ntBASIC13.38□□□□□ -0.27
Msh4Q99MT2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Msh4Q99MT2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.37□□□□□ -0.27
Msh4Q99MT2 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.37□□□□□ -0.27
Msh4Q99MT2 Gm16215-201ENSMUST00000161990 637 ntBASIC13.37□□□□□ -0.27
Msh4Q99MT2 Gm5866-201ENSMUST00000177881 973 ntBASIC13.37□□□□□ -0.27
Msh4Q99MT2 Gm33320-201ENSMUST00000192232 530 ntBASIC13.37□□□□□ -0.27
Msh4Q99MT2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.37□□□□□ -0.27
Msh4Q99MT2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.37□□□□□ -0.27
Msh4Q99MT2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Msh4Q99MT2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Msh4Q99MT2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms