Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Gm15376-201ENSMUST00000122258 783 ntBASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Gm17150-201ENSMUST00000165577 381 ntBASIC13.55□□□□□ -0.24
Clcc1Q99LI2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Gm19078-201ENSMUST00000206311 727 ntBASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Gm5356-201ENSMUST00000093326 615 ntBASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clcc1Q99LI2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Gm27892-201ENSMUST00000185017 106 ntBASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clcc1Q99LI2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Gm4984-201ENSMUST00000115987 360 ntBASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Gm11524-201ENSMUST00000119349 807 ntBASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 321.8 ms