Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhga4Q91XY4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdhga4Q91XY4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga4Q91XY4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga4Q91XY4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms