Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gm27702-201ENSMUST00000184512 56 ntBASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gm21470-201ENSMUST00000187680 696 ntBASIC13.76□□□□□ -0.21
Vps39Q8R5L3 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Shd-206ENSMUST00000225145 998 ntBASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gm8396-201ENSMUST00000057361 823 ntBASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps39Q8R5L3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps39Q8R5L3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm26308-201ENSMUST00000157768 69 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm4804-201ENSMUST00000182234 999 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm27533-201ENSMUST00000183800 152 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm46209-201ENSMUST00000217912 553 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Vps39Q8R5L3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms