Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Gm14140-201ENSMUST00000119999 995 ntBASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nup35Q8R4R6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm15427-201ENSMUST00000117288 531 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm13823-201ENSMUST00000119930 345 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm44492-201ENSMUST00000197012 141 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms