Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm9949Q8C9F4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Gm9949Q8C9F4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm9522-201ENSMUST00000182394 926 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.82□□□□□ -0.68
Gm9949Q8C9F4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms