Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gm12341-201ENSMUST00000119724 503 ntBASIC16.04■□□□□ 0.16
Usp44Q8C2S0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.04■□□□□ 0.16
Usp44Q8C2S0 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.04■□□□□ 0.16
Usp44Q8C2S0 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp44Q8C2S0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm19220-201ENSMUST00000222682 803 ntBASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Usp44Q8C2S0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.02■□□□□ 0.16
Usp44Q8C2S0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.02■□□□□ 0.16
Usp44Q8C2S0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp44Q8C2S0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp44Q8C2S0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms