Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh3rf3Q8C120 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Gm10766-202ENSMUST00000194123 606 ntBASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf3Q8C120 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Gm12585-201ENSMUST00000117307 290 ntBASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf3Q8C120 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms