Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Sh3rf2Q8BZT2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Gm18473-201ENSMUST00000220543 868 ntBASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Gm17330-201ENSMUST00000221047 165 ntBASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sh3rf2Q8BZT2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Gm10012-201ENSMUST00000078252 192 ntBASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sh3rf2Q8BZT2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms