Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Gm13600-201ENSMUST00000117949 744 ntBASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Chd9Q8BYH8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Gm24420-201ENSMUST00000176676 59 ntBASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd9Q8BYH8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd9Q8BYH8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms