Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab11fip4Q8BQP8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Gm33320-201ENSMUST00000192232 530 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Gm42612-201ENSMUST00000197986 623 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Gm6745-201ENSMUST00000199216 526 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Gm43170-201ENSMUST00000199827 612 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab11fip4Q8BQP8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rab11fip4Q8BQP8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab11fip4Q8BQP8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rab11fip4Q8BQP8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab11fip4Q8BQP8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.21■□□□□ 0.02
Rab11fip4Q8BQP8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab11fip4Q8BQP8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm22189-201ENSMUST00000103822 86 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm15393-201ENSMUST00000120499 219 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm23984-201ENSMUST00000157139 203 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm28760-201ENSMUST00000185995 736 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm9797-201ENSMUST00000052902 613 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab11fip4Q8BQP8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms