Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm14350-201ENSMUST00000116642 640 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smg1Q8BKX6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.33□□□□□ -0.59
Smg1Q8BKX6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Smg1Q8BKX6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Smg1Q8BKX6 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.33□□□□□ -0.59
Smg1Q8BKX6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smg1Q8BKX6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gm8885-201ENSMUST00000189382 598 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smg1Q8BKX6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.32□□□□□ -0.6
Smg1Q8BKX6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.31□□□□□ -0.6
Smg1Q8BKX6 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms