Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm13385-201ENSMUST00000121089 220 ntBASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm27437-201ENSMUST00000183429 107 ntBASIC13.56□□□□□ -0.24
Ubp1Q811S7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm6218-201ENSMUST00000219812 628 ntBASIC13.56□□□□□ -0.24
Ubp1Q811S7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.55□□□□□ -0.24
Ubp1Q811S7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.55□□□□□ -0.24
Ubp1Q811S7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.55□□□□□ -0.24
Ubp1Q811S7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ubp1Q811S7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.55□□□□□ -0.24
Ubp1Q811S7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.55□□□□□ -0.24
Ubp1Q811S7 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.55□□□□□ -0.24
Ubp1Q811S7 Gm9797-201ENSMUST00000052902 613 ntBASIC13.55□□□□□ -0.24
Ubp1Q811S7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubp1Q811S7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.54□□□□□ -0.24
Ubp1Q811S7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm21854-201ENSMUST00000179901 471 ntBASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.54□□□□□ -0.24
Ubp1Q811S7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm17795-201ENSMUST00000214505 757 ntBASIC13.54□□□□□ -0.24
Ubp1Q811S7 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.54□□□□□ -0.24
Ubp1Q811S7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ubp1Q811S7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms