Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.15□□□□□ -0.3
Runx1t1Q61909 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Gm27631-201ENSMUST00000184163 466 ntBASIC13.15□□□□□ -0.3
Runx1t1Q61909 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.15□□□□□ -0.3
Runx1t1Q61909 Gm5779-201ENSMUST00000218467 910 ntBASIC13.15□□□□□ -0.3
Runx1t1Q61909 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Runx1t1Q61909 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Runx1t1Q61909 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Runx1t1Q61909 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 BC001981-202ENSMUST00000191393 1545 ntBASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gm24158-201ENSMUST00000175263 71 ntBASIC13.14□□□□□ -0.31
Runx1t1Q61909 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Runx1t1Q61909 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Gm15957-201ENSMUST00000118893 974 ntBASIC13.13□□□□□ -0.31
Runx1t1Q61909 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Gm45453-201ENSMUST00000211758 853 ntBASIC13.13□□□□□ -0.31
Runx1t1Q61909 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Runx1t1Q61909 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.13□□□□□ -0.31
Runx1t1Q61909 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.12□□□□□ -0.31
Runx1t1Q61909 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1t1Q61909 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Runx1t1Q61909 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms