Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usf1Q61069 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usf1Q61069 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.45□□□□□ -0.42
Usf1Q61069 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.45□□□□□ -0.42
Usf1Q61069 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.45□□□□□ -0.42
Usf1Q61069 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Mir3547-201ENSMUST00000175461 88 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 Gm29608-201ENSMUST00000190444 463 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 Gm10608-202ENSMUST00000213924 676 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.45□□□□□ -0.42
Usf1Q61069 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usf1Q61069 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Mir433-201ENSMUST00000093564 124 ntBASIC12.45□□□□□ -0.42
Usf1Q61069 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usf1Q61069 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.45□□□□□ -0.42
Usf1Q61069 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.45□□□□□ -0.42
Usf1Q61069 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Usf1Q61069 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usf1Q61069 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Usf1Q61069 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Usf1Q61069 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Usf1Q61069 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.44□□□□□ -0.42
Usf1Q61069 Mir5132-201ENSMUST00000175166 71 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Gm27320-201ENSMUST00000184892 109 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 Gm18753-201ENSMUST00000201000 566 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 Gm17330-201ENSMUST00000221047 165 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.44□□□□□ -0.42
Usf1Q61069 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usf1Q61069 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.44□□□□□ -0.42
Usf1Q61069 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.44□□□□□ -0.42
Usf1Q61069 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usf1Q61069 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms