Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Gm11425-201ENSMUST00000119608 498 ntBASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Gm38144-201ENSMUST00000192790 465 ntBASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Gm7561-201ENSMUST00000211203 886 ntBASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Gm9396-201ENSMUST00000076703 567 ntBASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38aQ4FK66 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Gm18473-201ENSMUST00000220543 868 ntBASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.98■□□□□ 0.15
Prpf38aQ4FK66 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm12403-201ENSMUST00000121384 959 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm27847-201ENSMUST00000183711 107 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm27375-201ENSMUST00000183799 107 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms