Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ckap2Q3V1H1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ckap2Q3V1H1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Ckap2Q3V1H1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ckap2Q3V1H1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Gm12341-201ENSMUST00000119724 503 ntBASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ckap2Q3V1H1 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Gm18624-201ENSMUST00000220966 658 ntBASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ckap2Q3V1H1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms