Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm13365-201ENSMUST00000121188 973 ntBASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gm18889-201ENSMUST00000174284 929 ntBASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Gm25925-201ENSMUST00000158314 306 ntBASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Fndc4Q3TR08 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fndc4Q3TR08 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Mir6990-201ENSMUST00000183724 91 ntBASIC11.7□□□□□ -0.54
Fndc4Q3TR08 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Chchd1-203ENSMUST00000224633 557 ntBASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fndc4Q3TR08 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms