Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhej1Q3KNJ2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Gm6916-202ENSMUST00000205523 195 ntBASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Dupd1-202ENSMUST00000224735 548 ntBASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Mir497b-201ENSMUST00000093601 125 ntBASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhej1Q3KNJ2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Gm25911-201ENSMUST00000157621 56 ntBASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Mir6990-201ENSMUST00000183724 91 ntBASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhej1Q3KNJ2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhej1Q3KNJ2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhej1Q3KNJ2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhej1Q3KNJ2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nhej1Q3KNJ2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms