Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.49□□□□□ -0.25
Sox4Q06831 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox4Q06831 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox4Q06831 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox4Q06831 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox4Q06831 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox4Q06831 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox4Q06831 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox4Q06831 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Sox4Q06831 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Gm15376-201ENSMUST00000122258 783 ntBASIC13.48□□□□□ -0.25
Sox4Q06831 Gm12091-201ENSMUST00000146791 830 ntBASIC13.48□□□□□ -0.25
Sox4Q06831 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox4Q06831 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.48□□□□□ -0.25
Sox4Q06831 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.48□□□□□ -0.25
Sox4Q06831 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.48□□□□□ -0.25
Sox4Q06831 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox4Q06831 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox4Q06831 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox4Q06831 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox4Q06831 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox4Q06831 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox4Q06831 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Gm11524-201ENSMUST00000119349 807 ntBASIC13.47□□□□□ -0.25
Sox4Q06831 Gm12485-201ENSMUST00000119641 291 ntBASIC13.47□□□□□ -0.25
Sox4Q06831 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox4Q06831 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox4Q06831 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox4Q06831 Gm18018-201ENSMUST00000198273 408 ntBASIC13.47□□□□□ -0.25
Sox4Q06831 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox4Q06831 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox4Q06831 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Gm6180-201ENSMUST00000065243 498 ntBASIC13.47□□□□□ -0.25
Sox4Q06831 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox4Q06831 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Sox4Q06831 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox4Q06831 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox4Q06831 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox4Q06831 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sox4Q06831 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox4Q06831 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Sox4Q06831 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sox4Q06831 Gm6745-201ENSMUST00000199216 526 ntBASIC13.46□□□□□ -0.25
Sox4Q06831 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
Sox4Q06831 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox4Q06831 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox4Q06831 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox4Q06831 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.46□□□□□ -0.25
Sox4Q06831 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms