Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col6a2Q02788 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.69□□□□□ -0.22
Col6a2Q02788 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col6a2Q02788 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.69□□□□□ -0.22
Col6a2Q02788 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.69□□□□□ -0.22
Col6a2Q02788 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col6a2Q02788 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col6a2Q02788 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col6a2Q02788 Gm2445-201ENSMUST00000182798 989 ntBASIC13.69□□□□□ -0.22
Col6a2Q02788 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.69□□□□□ -0.22
Col6a2Q02788 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.69□□□□□ -0.22
Col6a2Q02788 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col6a2Q02788 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Col6a2Q02788 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.69□□□□□ -0.22
Col6a2Q02788 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a2Q02788 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Col6a2Q02788 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Col6a2Q02788 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Col6a2Q02788 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a2Q02788 Gm15806-201ENSMUST00000120696 955 ntBASIC13.68□□□□□ -0.22
Col6a2Q02788 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Col6a2Q02788 Gm8602-201ENSMUST00000184045 607 ntBASIC13.68□□□□□ -0.22
Col6a2Q02788 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.68□□□□□ -0.22
Col6a2Q02788 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a2Q02788 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a2Q02788 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a2Q02788 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.67□□□□□ -0.22
Col6a2Q02788 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Gm13689-201ENSMUST00000119360 685 ntBASIC13.67□□□□□ -0.22
Col6a2Q02788 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a2Q02788 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Gm18187-201ENSMUST00000196476 984 ntBASIC13.67□□□□□ -0.22
Col6a2Q02788 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a2Q02788 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a2Q02788 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a2Q02788 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a2Q02788 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a2Q02788 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms