Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx3-2P97503 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Gm23984-201ENSMUST00000157139 203 ntBASIC12.98□□□□□ -0.33
Nkx3-2P97503 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Mir6392-201ENSMUST00000184924 108 ntBASIC12.98□□□□□ -0.33
Nkx3-2P97503 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.98□□□□□ -0.33
Nkx3-2P97503 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx3-2P97503 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.98□□□□□ -0.33
Nkx3-2P97503 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx3-2P97503 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.97□□□□□ -0.33
Nkx3-2P97503 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.97□□□□□ -0.33
Nkx3-2P97503 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm18905-201ENSMUST00000205454 928 ntBASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm17795-201ENSMUST00000214505 757 ntBASIC12.97□□□□□ -0.33
Nkx3-2P97503 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.97□□□□□ -0.33
Nkx3-2P97503 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx3-2P97503 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms