Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.18□□□□□ -0.3
Prox1P48437 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Prox1P48437 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.18□□□□□ -0.3
Prox1P48437 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.18□□□□□ -0.3
Prox1P48437 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Gm14494-201ENSMUST00000118786 435 ntBASIC13.18□□□□□ -0.3
Prox1P48437 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.18□□□□□ -0.3
Prox1P48437 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Prox1P48437 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Gm17968-201ENSMUST00000194902 784 ntBASIC13.18□□□□□ -0.3
Prox1P48437 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.18□□□□□ -0.3
Prox1P48437 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.18□□□□□ -0.3
Prox1P48437 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.18□□□□□ -0.3
Prox1P48437 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.18□□□□□ -0.3
Prox1P48437 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.18□□□□□ -0.3
Prox1P48437 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prox1P48437 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Prox1P48437 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.17□□□□□ -0.3
Prox1P48437 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.17□□□□□ -0.3
Prox1P48437 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.17□□□□□ -0.3
Prox1P48437 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prox1P48437 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prox1P48437 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.17□□□□□ -0.3
Prox1P48437 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.17□□□□□ -0.3
Prox1P48437 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.17□□□□□ -0.3
Prox1P48437 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prox1P48437 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.17□□□□□ -0.3
Prox1P48437 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prox1P48437 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.16□□□□□ -0.3
Prox1P48437 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prox1P48437 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.16□□□□□ -0.3
Prox1P48437 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms