Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm22619-201ENSMUST00000179516 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm25255-201ENSMUST00000179579 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24755-201ENSMUST00000179691 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm26506-201ENSMUST00000179692 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm25086-201ENSMUST00000179931 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm23243-201ENSMUST00000180047 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24659-201ENSMUST00000180212 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24169-201ENSMUST00000180244 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm23689-201ENSMUST00000180354 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm27359-201ENSMUST00000184153 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm27631-201ENSMUST00000184163 466 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm27785-201ENSMUST00000184268 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm27466-201ENSMUST00000184396 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm27703-201ENSMUST00000184836 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfx3P48381 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfx3P48381 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfx3P48381 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx3P48381 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm45453-201ENSMUST00000211758 853 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rfx3P48381 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rfx3P48381 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 BC001981-202ENSMUST00000191393 1545 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Rfx3P48381 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.41□□□□□ -0.42
Rfx3P48381 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.41□□□□□ -0.42
Rfx3P48381 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 Gm5566-201ENSMUST00000116118 459 ntBASIC12.41□□□□□ -0.42
Rfx3P48381 Gm15920-201ENSMUST00000118998 402 ntBASIC12.41□□□□□ -0.42
Rfx3P48381 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
Rfx3P48381 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 AA543401-201ENSMUST00000164248 1269 ntBASIC12.41□□□□□ -0.42
Rfx3P48381 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Rfx3P48381 Gm18766-201ENSMUST00000189811 808 ntBASIC12.41□□□□□ -0.42
Rfx3P48381 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.41□□□□□ -0.42
Rfx3P48381 Chchd1-203ENSMUST00000224633 557 ntBASIC12.41□□□□□ -0.42
Rfx3P48381 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rfx3P48381 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx3P48381 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rfx3P48381 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rfx3P48381 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Rfx3P48381 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.4□□□□□ -0.42
Rfx3P48381 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rfx3P48381 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx3P48381 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms