Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx2P48379 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx2P48379 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfx2P48379 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rfx2P48379 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Grk6-205ENSMUST00000224653 2976 ntBASIC14.38□□□□□ -0.11
Rfx2P48379 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfx2P48379 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.38□□□□□ -0.11
Rfx2P48379 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.38□□□□□ -0.11
Rfx2P48379 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.38□□□□□ -0.11
Rfx2P48379 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.38□□□□□ -0.11
Rfx2P48379 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rfx2P48379 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfx2P48379 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx2P48379 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rfx2P48379 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfx2P48379 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfx2P48379 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfx2P48379 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Gm15806-201ENSMUST00000120696 955 ntBASIC14.37□□□□□ -0.11
Rfx2P48379 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Gm9002-201ENSMUST00000178437 499 ntBASIC14.37□□□□□ -0.11
Rfx2P48379 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.37□□□□□ -0.11
Rfx2P48379 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.37□□□□□ -0.11
Rfx2P48379 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rfx2P48379 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfx2P48379 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx2P48379 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx2P48379 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Rfx2P48379 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm6912-201ENSMUST00000117218 544 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 Gm12341-201ENSMUST00000119724 503 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfx2P48379 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm18905-201ENSMUST00000205454 928 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.36□□□□□ -0.11
Rfx2P48379 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfx2P48379 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms