Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HttP42859 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.25□□□□□ -0.13
HttP42859 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HttP42859 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Gm13035-201ENSMUST00000117496 342 ntBASIC14.24□□□□□ -0.13
HttP42859 Gm6447-201ENSMUST00000118905 835 ntBASIC14.24□□□□□ -0.13
HttP42859 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.24□□□□□ -0.13
HttP42859 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Gm14460-201ENSMUST00000121511 639 ntBASIC14.24□□□□□ -0.13
HttP42859 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HttP42859 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HttP42859 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HttP42859 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.24□□□□□ -0.13
HttP42859 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.24□□□□□ -0.13
HttP42859 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HttP42859 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HttP42859 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HttP42859 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.23□□□□□ -0.13
HttP42859 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.23□□□□□ -0.13
HttP42859 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.23□□□□□ -0.13
HttP42859 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.23□□□□□ -0.13
HttP42859 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.23□□□□□ -0.13
HttP42859 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HttP42859 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.23□□□□□ -0.13
HttP42859 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HttP42859 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.23□□□□□ -0.13
HttP42859 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HttP42859 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.23□□□□□ -0.13
HttP42859 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.23□□□□□ -0.13
HttP42859 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HttP42859 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.22□□□□□ -0.13
HttP42859 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HttP42859 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.22□□□□□ -0.13
HttP42859 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.22□□□□□ -0.13
HttP42859 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.22□□□□□ -0.13
HttP42859 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.22□□□□□ -0.13
HttP42859 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.22□□□□□ -0.13
HttP42859 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.22□□□□□ -0.13
HttP42859 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.22□□□□□ -0.13
HttP42859 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HttP42859 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HttP42859 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.21□□□□□ -0.13
HttP42859 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.21□□□□□ -0.13
HttP42859 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.21□□□□□ -0.13
HttP42859 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.21□□□□□ -0.13
HttP42859 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Gm13296-201ENSMUST00000117854 997 ntBASIC14.21□□□□□ -0.13
HttP42859 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms