Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Fen1P39749 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.81□□□□□ -0.2
Fen1P39749 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.81□□□□□ -0.2
Fen1P39749 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.81□□□□□ -0.2
Fen1P39749 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
Fen1P39749 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.81□□□□□ -0.2
Fen1P39749 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.81□□□□□ -0.2
Fen1P39749 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.81□□□□□ -0.2
Fen1P39749 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Fen1P39749 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Fen1P39749 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.81□□□□□ -0.2
Fen1P39749 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.81□□□□□ -0.2
Fen1P39749 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Fen1P39749 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Fen1P39749 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Rubie-203ENSMUST00000227803 2430 ntBASIC13.8□□□□□ -0.2
Fen1P39749 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Fen1P39749 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.8□□□□□ -0.2
Fen1P39749 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Fen1P39749 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.8□□□□□ -0.2
Fen1P39749 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Fen1P39749 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Fen1P39749 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.8□□□□□ -0.2
Fen1P39749 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fen1P39749 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Fen1P39749 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Fen1P39749 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Fen1P39749 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.79□□□□□ -0.2
Fen1P39749 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.79□□□□□ -0.2
Fen1P39749 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Gm12882-201ENSMUST00000121696 517 ntBASIC13.79□□□□□ -0.2
Fen1P39749 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.79□□□□□ -0.2
Fen1P39749 Mir3113-201ENSMUST00000175478 76 ntBASIC13.79□□□□□ -0.2
Fen1P39749 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Fen1P39749 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.79□□□□□ -0.2
Fen1P39749 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.79□□□□□ -0.2
Fen1P39749 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.79□□□□□ -0.2
Fen1P39749 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Fen1P39749 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fen1P39749 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms