Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LdlrP35951 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Gm13453-201ENSMUST00000118708 357 ntBASIC13.68□□□□□ -0.22
LdlrP35951 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.68□□□□□ -0.22
LdlrP35951 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.68□□□□□ -0.22
LdlrP35951 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Gm27989-201ENSMUST00000184721 107 ntBASIC13.68□□□□□ -0.22
LdlrP35951 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.68□□□□□ -0.22
LdlrP35951 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.67□□□□□ -0.22
LdlrP35951 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LdlrP35951 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.67□□□□□ -0.22
LdlrP35951 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.67□□□□□ -0.22
LdlrP35951 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.67□□□□□ -0.22
LdlrP35951 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.67□□□□□ -0.22
LdlrP35951 Gm9824-201ENSMUST00000178707 561 ntBASIC13.67□□□□□ -0.22
LdlrP35951 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.67□□□□□ -0.22
LdlrP35951 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.67□□□□□ -0.22
LdlrP35951 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Gm2423-201ENSMUST00000074863 733 ntBASIC13.67□□□□□ -0.22
LdlrP35951 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LdlrP35951 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.67□□□□□ -0.22
LdlrP35951 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.67□□□□□ -0.22
LdlrP35951 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.67□□□□□ -0.22
LdlrP35951 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LdlrP35951 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.67□□□□□ -0.22
LdlrP35951 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LdlrP35951 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.67□□□□□ -0.22
LdlrP35951 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LdlrP35951 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LdlrP35951 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LdlrP35951 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LdlrP35951 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LdlrP35951 Gm29310-201ENSMUST00000185468 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21825-201ENSMUST00000185728 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm29109-201ENSMUST00000185895 696 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms