Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Rfc1P35601 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rfc1P35601 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfc1P35601 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Rfc1P35601 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.46□□□□□ -0.09
Rfc1P35601 Gm16026-204ENSMUST00000162652 683 ntBASIC14.46□□□□□ -0.09
Rfc1P35601 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.46□□□□□ -0.09
Rfc1P35601 Gm9182-201ENSMUST00000217829 639 ntBASIC14.46□□□□□ -0.09
Rfc1P35601 Psmb5-202ENSMUST00000227257 622 ntBASIC14.46□□□□□ -0.09
Rfc1P35601 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfc1P35601 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfc1P35601 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfc1P35601 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfc1P35601 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfc1P35601 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rfc1P35601 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfc1P35601 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.45□□□□□ -0.1
Rfc1P35601 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.45□□□□□ -0.1
Rfc1P35601 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.45□□□□□ -0.1
Rfc1P35601 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.45□□□□□ -0.1
Rfc1P35601 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.45□□□□□ -0.1
Rfc1P35601 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.45□□□□□ -0.1
Rfc1P35601 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Rfc1P35601 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfc1P35601 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfc1P35601 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.44□□□□□ -0.1
Rfc1P35601 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfc1P35601 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfc1P35601 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.44□□□□□ -0.1
Rfc1P35601 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rfc1P35601 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.44□□□□□ -0.1
Rfc1P35601 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfc1P35601 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfc1P35601 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rfc1P35601 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.43□□□□□ -0.1
Rfc1P35601 Gm16198-201ENSMUST00000118766 670 ntBASIC14.43□□□□□ -0.1
Rfc1P35601 Gm1401-201ENSMUST00000122048 772 ntBASIC14.43□□□□□ -0.1
Rfc1P35601 Gm5177-201ENSMUST00000183092 997 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms