Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.08□□□□□ -0.48
Cd28P31041 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cd28P31041 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.08□□□□□ -0.48
Cd28P31041 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cd28P31041 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Cd28P31041 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cd28P31041 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Cd28P31041 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.07□□□□□ -0.48
Cd28P31041 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cd28P31041 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.07□□□□□ -0.48
Cd28P31041 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.07□□□□□ -0.48
Cd28P31041 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cd28P31041 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cd28P31041 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Gm5864-201ENSMUST00000202263 970 ntBASIC12.07□□□□□ -0.48
Cd28P31041 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.07□□□□□ -0.48
Cd28P31041 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.07□□□□□ -0.48
Cd28P31041 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd28P31041 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Cd28P31041 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms