Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.65□□□□□ -0.38
Nedd8P29595 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd8P29595 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Nedd8P29595 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Nedd8P29595 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd8P29595 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.64□□□□□ -0.39
Nedd8P29595 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nedd8P29595 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.64□□□□□ -0.39
Nedd8P29595 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Nedd8P29595 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nedd8P29595 Gm29257-201ENSMUST00000186115 639 ntBASIC12.64□□□□□ -0.39
Nedd8P29595 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.64□□□□□ -0.39
Nedd8P29595 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nedd8P29595 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.64□□□□□ -0.39
Nedd8P29595 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nedd8P29595 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nedd8P29595 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.64□□□□□ -0.39
Nedd8P29595 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nedd8P29595 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nedd8P29595 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nedd8P29595 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.63□□□□□ -0.39
Nedd8P29595 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.63□□□□□ -0.39
Nedd8P29595 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.63□□□□□ -0.39
Nedd8P29595 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.63□□□□□ -0.39
Nedd8P29595 Gm12644-201ENSMUST00000119935 606 ntBASIC12.63□□□□□ -0.39
Nedd8P29595 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.63□□□□□ -0.39
Nedd8P29595 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Gm4535-201ENSMUST00000182274 558 ntBASIC12.63□□□□□ -0.39
Nedd8P29595 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.63□□□□□ -0.39
Nedd8P29595 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.63□□□□□ -0.39
Nedd8P29595 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Gm10355-201ENSMUST00000097146 517 ntBASIC12.63□□□□□ -0.39
Nedd8P29595 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nedd8P29595 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Syt7-205ENSMUST00000224135 1557 ntBASIC12.63□□□□□ -0.39
Nedd8P29595 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.63□□□□□ -0.39
Nedd8P29595 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.63□□□□□ -0.39
Nedd8P29595 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Nedd8P29595 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nedd8P29595 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nedd8P29595 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nedd8P29595 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms