Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tnfrsf9P20334 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Gm10766-202ENSMUST00000194123 606 ntBASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tnfrsf9P20334 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.31□□□□□ -0.6
Tnfrsf9P20334 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Dupd1-202ENSMUST00000224735 548 ntBASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tnfrsf9P20334 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfrsf9P20334 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms