Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Usp53P15975 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.84■□□□□ 0.13
Usp53P15975 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Usp53P15975 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Usp53P15975 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.84■□□□□ 0.13
Usp53P15975 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Usp53P15975 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp53P15975 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Usp53P15975 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Usp53P15975 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Usp53P15975 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.83■□□□□ 0.13
Usp53P15975 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.83■□□□□ 0.12
Usp53P15975 Gm27839-201ENSMUST00000184242 106 ntBASIC15.83■□□□□ 0.12
Usp53P15975 Gm38223-201ENSMUST00000194484 695 ntBASIC15.83■□□□□ 0.12
Usp53P15975 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp53P15975 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp53P15975 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.83■□□□□ 0.12
Usp53P15975 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp53P15975 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp53P15975 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Usp53P15975 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp53P15975 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Usp53P15975 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Usp53P15975 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm12403-201ENSMUST00000121384 959 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.82■□□□□ 0.12
Usp53P15975 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm42550-201ENSMUST00000201553 960 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp53P15975 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Gm25857-201ENSMUST00000082788 129 ntBASIC15.82■□□□□ 0.12
Usp53P15975 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp53P15975 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp53P15975 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp53P15975 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp53P15975 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp53P15975 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp53P15975 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp53P15975 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Usp53P15975 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp53P15975 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp53P15975 Gm13829-201ENSMUST00000119600 138 ntBASIC15.81■□□□□ 0.12
Usp53P15975 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.81■□□□□ 0.12
Usp53P15975 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms