Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.53□□□□□ -0.08
TnfP06804 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TnfP06804 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TnfP06804 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TnfP06804 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.52□□□□□ -0.08
TnfP06804 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TnfP06804 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
TnfP06804 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TnfP06804 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TnfP06804 Gm11814-201ENSMUST00000119515 929 ntBASIC14.52□□□□□ -0.09
TnfP06804 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.52□□□□□ -0.09
TnfP06804 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.52□□□□□ -0.09
TnfP06804 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TnfP06804 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TnfP06804 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TnfP06804 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.52□□□□□ -0.09
TnfP06804 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TnfP06804 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.52□□□□□ -0.09
TnfP06804 Gm18062-201ENSMUST00000208020 547 ntBASIC14.52□□□□□ -0.09
TnfP06804 Gm18055-201ENSMUST00000208254 547 ntBASIC14.52□□□□□ -0.09
TnfP06804 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.52□□□□□ -0.09
TnfP06804 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.52□□□□□ -0.09
TnfP06804 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TnfP06804 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TnfP06804 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TnfP06804 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TnfP06804 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TnfP06804 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TnfP06804 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.51□□□□□ -0.09
TnfP06804 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
TnfP06804 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm12390-201ENSMUST00000117897 397 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm12403-201ENSMUST00000121384 959 ntBASIC14.51□□□□□ -0.09
TnfP06804 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.51□□□□□ -0.09
TnfP06804 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.51□□□□□ -0.09
TnfP06804 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.51□□□□□ -0.09
TnfP06804 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.51□□□□□ -0.09
TnfP06804 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.51□□□□□ -0.09
TnfP06804 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TnfP06804 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TnfP06804 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TnfP06804 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TnfP06804 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TnfP06804 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TnfP06804 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.5□□□□□ -0.09
TnfP06804 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TnfP06804 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TnfP06804 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.5□□□□□ -0.09
TnfP06804 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TnfP06804 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TnfP06804 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TnfP06804 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms