Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.8□□□□□ -0.04
Vti1aO89116 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vti1aO89116 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.8□□□□□ -0.04
Vti1aO89116 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.8□□□□□ -0.04
Vti1aO89116 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vti1aO89116 Gm37714-201ENSMUST00000194742 342 ntBASIC14.8□□□□□ -0.04
Vti1aO89116 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.8□□□□□ -0.04
Vti1aO89116 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vti1aO89116 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Vti1aO89116 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vti1aO89116 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.8□□□□□ -0.04
Vti1aO89116 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.8□□□□□ -0.04
Vti1aO89116 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1aO89116 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.79□□□□□ -0.04
Vti1aO89116 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.79□□□□□ -0.04
Vti1aO89116 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vti1aO89116 Mir1938-201ENSMUST00000158746 100 ntBASIC14.79□□□□□ -0.04
Vti1aO89116 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Gm27839-201ENSMUST00000184242 106 ntBASIC14.79□□□□□ -0.04
Vti1aO89116 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.79□□□□□ -0.04
Vti1aO89116 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Gm18027-201ENSMUST00000218947 619 ntBASIC14.79□□□□□ -0.04
Vti1aO89116 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vti1aO89116 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1aO89116 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vti1aO89116 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vti1aO89116 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vti1aO89116 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Vti1aO89116 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.78□□□□□ -0.04
Vti1aO89116 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Gm18905-201ENSMUST00000205454 928 ntBASIC14.78□□□□□ -0.04
Vti1aO89116 Gm44608-201ENSMUST00000206827 855 ntBASIC14.78□□□□□ -0.04
Vti1aO89116 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.78□□□□□ -0.04
Vti1aO89116 Gm17794-201ENSMUST00000220252 955 ntBASIC14.78□□□□□ -0.04
Vti1aO89116 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Vti1aO89116 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Vti1aO89116 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1aO89116 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1aO89116 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms