Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.8■□□□□ 0.44
Apaf1O88879 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.8■□□□□ 0.44
Apaf1O88879 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.8■□□□□ 0.44
Apaf1O88879 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.8■□□□□ 0.44
Apaf1O88879 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.8■□□□□ 0.44
Apaf1O88879 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Apaf1O88879 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Apaf1O88879 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Apaf1O88879 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Apaf1O88879 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apaf1O88879 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Gm29608-201ENSMUST00000190444 463 ntBASIC17.79■□□□□ 0.44
Apaf1O88879 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.79■□□□□ 0.44
Apaf1O88879 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Apaf1O88879 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Acot6-202ENSMUST00000222921 3622 ntBASIC17.79■□□□□ 0.44
Apaf1O88879 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.79■□□□□ 0.44
Apaf1O88879 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Apaf1O88879 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Apaf1O88879 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.78■□□□□ 0.44
Apaf1O88879 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Apaf1O88879 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.78■□□□□ 0.44
Apaf1O88879 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Apaf1O88879 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.78■□□□□ 0.44
Apaf1O88879 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.78■□□□□ 0.44
Apaf1O88879 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Apaf1O88879 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Apaf1O88879 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Apaf1O88879 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Apaf1O88879 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Apaf1O88879 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Apaf1O88879 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Apaf1O88879 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Apaf1O88879 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Apaf1O88879 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Apaf1O88879 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.77■□□□□ 0.44
Apaf1O88879 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.77■□□□□ 0.44
Apaf1O88879 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Apaf1O88879 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms