Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.25□□□□□ -0.45
CcnkO88874 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.25□□□□□ -0.45
CcnkO88874 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.25□□□□□ -0.45
CcnkO88874 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CcnkO88874 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.24□□□□□ -0.45
CcnkO88874 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CcnkO88874 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CcnkO88874 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.24□□□□□ -0.45
CcnkO88874 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.24□□□□□ -0.45
CcnkO88874 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.24□□□□□ -0.45
CcnkO88874 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CcnkO88874 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CcnkO88874 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CcnkO88874 Gm27920-201ENSMUST00000183953 96 ntBASIC12.24□□□□□ -0.45
CcnkO88874 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.24□□□□□ -0.45
CcnkO88874 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CcnkO88874 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.24□□□□□ -0.45
CcnkO88874 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CcnkO88874 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CcnkO88874 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
CcnkO88874 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.23□□□□□ -0.45
CcnkO88874 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.23□□□□□ -0.45
CcnkO88874 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.23□□□□□ -0.45
CcnkO88874 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Gm37230-201ENSMUST00000194491 818 ntBASIC12.23□□□□□ -0.45
CcnkO88874 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.23□□□□□ -0.45
CcnkO88874 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.23□□□□□ -0.45
CcnkO88874 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.23□□□□□ -0.45
CcnkO88874 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.23□□□□□ -0.45
CcnkO88874 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.23□□□□□ -0.45
CcnkO88874 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CcnkO88874 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CcnkO88874 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CcnkO88874 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CcnkO88874 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.22□□□□□ -0.45
CcnkO88874 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CcnkO88874 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.22□□□□□ -0.45
CcnkO88874 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CcnkO88874 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms