Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.11□□□□□ -0.31
Vti1bO88384 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Gm13823-201ENSMUST00000119930 345 ntBASIC13.11□□□□□ -0.31
Vti1bO88384 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Vti1bO88384 Gm18766-201ENSMUST00000189811 808 ntBASIC13.11□□□□□ -0.31
Vti1bO88384 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Gm5779-201ENSMUST00000218467 910 ntBASIC13.11□□□□□ -0.31
Vti1bO88384 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.11□□□□□ -0.31
Vti1bO88384 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vti1bO88384 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Vti1bO88384 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Vti1bO88384 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.11□□□□□ -0.31
Vti1bO88384 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1bO88384 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Vti1bO88384 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.1□□□□□ -0.31
Vti1bO88384 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.1□□□□□ -0.31
Vti1bO88384 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vti1bO88384 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.1□□□□□ -0.31
Vti1bO88384 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.1□□□□□ -0.31
Vti1bO88384 Gm25925-201ENSMUST00000158314 306 ntBASIC13.1□□□□□ -0.31
Vti1bO88384 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.1□□□□□ -0.31
Vti1bO88384 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.1□□□□□ -0.31
Vti1bO88384 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.1□□□□□ -0.31
Vti1bO88384 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.1□□□□□ -0.31
Vti1bO88384 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1bO88384 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Vti1bO88384 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Vti1bO88384 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vti1bO88384 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.09□□□□□ -0.31
Vti1bO88384 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Vti1bO88384 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.09□□□□□ -0.31
Vti1bO88384 Gm15693-201ENSMUST00000120470 637 ntBASIC13.09□□□□□ -0.31
Vti1bO88384 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vti1bO88384 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.09□□□□□ -0.31
Vti1bO88384 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms